AlphaFold Protein Folding Simulator

Biophysics Mechanics
Hydrophobic (H)
Polar (P)
Charged (+)
Charged (-)
Gibbs Free Energy (ΔG)
-42.8 kcal/mol
Conformation State
Stable Alpha-Helix fold
Hydrophobic Buried Ratio
0.72
Contact Density
0.38
Biophysics Insight: Drag any residue in the main viewport or adjust points on the Ramachandran plot to manipulate backbone torsion angles (φ, ψ). Energy updates continuously based on Lennard-Jones steric repulsions, hydrogen bonding, and hydrophobic solvent collapse.

Ramachandran Plot Controller (φ / ψ)

Region: Allowed Alpha-R

Residue Pairwise Contact Map Matrix

Supports 1-letter codes. Legend: H (Hydrophobic), P (Polar), + / - (Charged).
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