Gut Microbiome Ecosystem Simulator Lotka-Volterra Engine

Gut Lumen & Mucosal Barrier Simulation Balanced Ecosystem
Substrate Fermentation: Active
Epithelial Barrier: Intact (92%)
Bacteroides
Faecalibacterium (Butyrate)
Bifidobacterium
Akkermansia (Mucus)
Opportunistic Pathobionts
Shannon Diversity (H')
2.84
High Species Richness
Total SCFA Production
74.2 mmol/L
60:20:20 (Ace:Pro:But)
Mucosa Thickness
145 μm
Protective Layer
Acetate (Energy & Substrate) 42.5 mmol/L
Propionate (Satiety & Metabolic Control) 15.8 mmol/L
Butyrate (Colonocyte Fuel & Anti-inflammatory) 15.9 mmol/L
Prebiotic Substrates & Probiotics
1. Dietary Prebiotic Fibers (g/day)
15 g
20 g
10 g
5 g
2. Probiotic Strain Inoculation
B. infantis
Breaks down complex HMOs & inulin
F. prausnitzii
Key anti-inflammatory butyrate producer
A. muciniphila
Strengthens gut lining & mucin layer
L. rhamnosus
Produces lactate, lowers lumen pH

Ecosystem Diagnostic Evaluation

  • Diversity Index: Optimum diversity supported by varied fiber intake.
  • Barrier Health: Strong tight junction integrity. Low endotoxin leak potential.
  • Targeted Advice: Maintain resistant starch levels to sustain Faecalibacterium populations.
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